Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Gm11424-201ENSMUST00000121929 829 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Gm5279-201ENSMUST00000199575 745 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Gm15823-201ENSMUST00000064305 670 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcc2Q6PDG5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Gm5354-201ENSMUST00000182417 973 ntBASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcc2Q6PDG5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smarcc2Q6PDG5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Gm23984-201ENSMUST00000157139 203 ntBASIC15.76■□□□□ 0.11
Smarcc2Q6PDG5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms