Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Syt7-204ENSMUST00000223586 1344 ntBASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Gm17795-201ENSMUST00000214505 757 ntBASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ParpbpQ6IRT3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gm42790-201ENSMUST00000201268 969 ntBASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ParpbpQ6IRT3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ParpbpQ6IRT3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms