Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.51□□□□□ -0.41
AtmQ62388 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
AtmQ62388 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.51□□□□□ -0.41
AtmQ62388 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
AtmQ62388 Gm12165-201ENSMUST00000117047 342 ntBASIC12.51□□□□□ -0.41
AtmQ62388 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.51□□□□□ -0.41
AtmQ62388 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AtmQ62388 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.51□□□□□ -0.41
AtmQ62388 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.51□□□□□ -0.41
AtmQ62388 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.51□□□□□ -0.41
AtmQ62388 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AtmQ62388 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.51□□□□□ -0.41
AtmQ62388 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.51□□□□□ -0.41
AtmQ62388 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
AtmQ62388 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.5□□□□□ -0.41
AtmQ62388 Gm11978-201ENSMUST00000122315 466 ntBASIC12.5□□□□□ -0.41
AtmQ62388 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Gm17391-201ENSMUST00000171036 126 ntBASIC12.5□□□□□ -0.41
AtmQ62388 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.5□□□□□ -0.41
AtmQ62388 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.5□□□□□ -0.41
AtmQ62388 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AtmQ62388 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
AtmQ62388 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
AtmQ62388 Gm3096-201ENSMUST00000185770 364 ntBASIC12.5□□□□□ -0.41
AtmQ62388 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AtmQ62388 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AtmQ62388 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AtmQ62388 Gm12795-201ENSMUST00000117594 539 ntBASIC12.49□□□□□ -0.41
AtmQ62388 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.49□□□□□ -0.41
AtmQ62388 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AtmQ62388 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
AtmQ62388 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AtmQ62388 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.49□□□□□ -0.41
AtmQ62388 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
AtmQ62388 Gm25700-201ENSMUST00000177693 110 ntBASIC12.49□□□□□ -0.41
AtmQ62388 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.49□□□□□ -0.41
AtmQ62388 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.49□□□□□ -0.41
AtmQ62388 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.49□□□□□ -0.41
AtmQ62388 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AtmQ62388 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.48□□□□□ -0.41
AtmQ62388 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Gm10051-201ENSMUST00000145209 414 ntBASIC12.48□□□□□ -0.41
AtmQ62388 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Gm5369-201ENSMUST00000217499 588 ntBASIC12.48□□□□□ -0.41
AtmQ62388 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.48□□□□□ -0.41
AtmQ62388 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.48□□□□□ -0.41
AtmQ62388 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.48□□□□□ -0.41
AtmQ62388 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AtmQ62388 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms