Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim27Q62158 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim27Q62158 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim27Q62158 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim27Q62158 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim27Q62158 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim27Q62158 Gm12859-201ENSMUST00000117834 427 ntBASIC16.61■□□□□ 0.25
Trim27Q62158 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim27Q62158 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim27Q62158 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim27Q62158 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.61■□□□□ 0.25
Trim27Q62158 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.61■□□□□ 0.25
Trim27Q62158 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim27Q62158 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.61■□□□□ 0.25
Trim27Q62158 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim27Q62158 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trim27Q62158 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim27Q62158 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim27Q62158 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.6■□□□□ 0.25
Trim27Q62158 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.6■□□□□ 0.25
Trim27Q62158 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim27Q62158 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Gm38144-201ENSMUST00000192790 465 ntBASIC16.6■□□□□ 0.25
Trim27Q62158 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.6■□□□□ 0.25
Trim27Q62158 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Trim27Q62158 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.6■□□□□ 0.25
Trim27Q62158 Gm19220-201ENSMUST00000222682 803 ntBASIC16.6■□□□□ 0.25
Trim27Q62158 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trim27Q62158 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim27Q62158 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim27Q62158 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trim27Q62158 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.59■□□□□ 0.25
Trim27Q62158 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim27Q62158 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.59■□□□□ 0.25
Trim27Q62158 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim27Q62158 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim27Q62158 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Gm18624-201ENSMUST00000220966 658 ntBASIC16.59■□□□□ 0.25
Trim27Q62158 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim27Q62158 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim27Q62158 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trim27Q62158 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim27Q62158 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trim27Q62158 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trim27Q62158 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.58■□□□□ 0.25
Trim27Q62158 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim27Q62158 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms