Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.07□□□□□ -0.16
Smarcd1Q61466 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.07□□□□□ -0.16
Smarcd1Q61466 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.07□□□□□ -0.16
Smarcd1Q61466 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.07□□□□□ -0.16
Smarcd1Q61466 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.07□□□□□ -0.16
Smarcd1Q61466 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarcd1Q61466 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.06□□□□□ -0.16
Smarcd1Q61466 Gm8652-201ENSMUST00000181363 964 ntBASIC14.06□□□□□ -0.16
Smarcd1Q61466 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smarcd1Q61466 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.05□□□□□ -0.16
Smarcd1Q61466 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.05□□□□□ -0.16
Smarcd1Q61466 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Gm15824-201ENSMUST00000119516 955 ntBASIC14.05□□□□□ -0.16
Smarcd1Q61466 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.05□□□□□ -0.16
Smarcd1Q61466 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smarcd1Q61466 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms