Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mre11Q61216 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Mre11Q61216 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Mre11Q61216 Gm27920-201ENSMUST00000183953 96 ntBASIC16.21■□□□□ 0.19
Mre11Q61216 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.21■□□□□ 0.19
Mre11Q61216 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Mre11Q61216 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
Mre11Q61216 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mre11Q61216 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mre11Q61216 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Mre11Q61216 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Mre11Q61216 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mre11Q61216 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Mre11Q61216 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Mre11Q61216 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mre11Q61216 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Gm38116-201ENSMUST00000193873 1533 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC16.2■□□□□ 0.18
Mre11Q61216 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.2■□□□□ 0.18
Mre11Q61216 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.2■□□□□ 0.18
Mre11Q61216 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.2■□□□□ 0.18
Mre11Q61216 Gm6376-201ENSMUST00000209407 580 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 CT009764.1-201ENSMUST00000222260 483 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mre11Q61216 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.2■□□□□ 0.18
Mre11Q61216 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mre11Q61216 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Mre11Q61216 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Mre11Q61216 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.19■□□□□ 0.18
Mre11Q61216 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Mre11Q61216 Gm15173-201ENSMUST00000122049 433 ntBASIC16.19■□□□□ 0.18
Mre11Q61216 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.19■□□□□ 0.18
Mre11Q61216 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.19■□□□□ 0.18
Mre11Q61216 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Mre11Q61216 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.19■□□□□ 0.18
Mre11Q61216 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.19■□□□□ 0.18
Mre11Q61216 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Mre11Q61216 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Mre11Q61216 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.19■□□□□ 0.18
Mre11Q61216 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mre11Q61216 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.18■□□□□ 0.18
Mre11Q61216 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Mre11Q61216 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mre11Q61216 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.18■□□□□ 0.18
Mre11Q61216 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms