Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav15-1-dv6-1Q5R1D2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm14140-201ENSMUST00000119999 995 ntBASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm38225-201ENSMUST00000194001 393 ntBASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav15-1-dv6-1Q5R1D2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms