Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shank3Q4ACU6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.41■□□□□ 0.22
Shank3Q4ACU6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Gm12380-201ENSMUST00000119012 544 ntBASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Gm23699-201ENSMUST00000158835 135 ntBASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Gm27552-201ENSMUST00000183351 62 ntBASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Gm27844-201ENSMUST00000183613 62 ntBASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Gzmn-202ENSMUST00000225535 989 ntBASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shank3Q4ACU6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shank3Q4ACU6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Gm44545-201ENSMUST00000208262 746 ntBASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shank3Q4ACU6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms