Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hddc2Q3SXD3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm8749-201ENSMUST00000117737 331 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm43347-201ENSMUST00000200226 580 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm18246-201ENSMUST00000221023 728 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hddc2Q3SXD3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms