Protein–RNA interactions for Protein: Q0P523

Cib3, Calcium and integrin-binding family member 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cib3Q0P523 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
Cib3Q0P523 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Gm22697-201ENSMUST00000175194 63 ntBASIC10.19□□□□□ -0.78
Cib3Q0P523 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.19□□□□□ -0.78
Cib3Q0P523 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cib3Q0P523 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.18□□□□□ -0.78
Cib3Q0P523 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.18□□□□□ -0.78
Cib3Q0P523 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cib3Q0P523 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cib3Q0P523 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cib3Q0P523 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms