Protein–RNA interactions for Protein: Q08EE8

1700061G19Rik, RIKEN cDNA 1700061G19 gene, mousemouse

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700061G19RikQ08EE8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
1700061G19RikQ08EE8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Gm38144-201ENSMUST00000192790 465 ntBASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Gm43094-201ENSMUST00000196549 921 ntBASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
1700061G19RikQ08EE8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Syt7-204ENSMUST00000223586 1344 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Acot6-202ENSMUST00000222921 3622 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm11524-201ENSMUST00000119349 807 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm27437-201ENSMUST00000183429 107 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm28760-201ENSMUST00000185995 736 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm19078-201ENSMUST00000206311 727 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
1700061G19RikQ08EE8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms