Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Tff1Q08423 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Tff1Q08423 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tff1Q08423 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tff1Q08423 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tff1Q08423 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.27□□□□□ -0.6
Tff1Q08423 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Tff1Q08423 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.27□□□□□ -0.61
Tff1Q08423 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tff1Q08423 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.27□□□□□ -0.61
Tff1Q08423 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.27□□□□□ -0.61
Tff1Q08423 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Tff1Q08423 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Gm2445-201ENSMUST00000182798 989 ntBASIC11.27□□□□□ -0.61
Tff1Q08423 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.27□□□□□ -0.61
Tff1Q08423 Gm9794-201ENSMUST00000202370 423 ntBASIC11.27□□□□□ -0.61
Tff1Q08423 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tff1Q08423 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tff1Q08423 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.27□□□□□ -0.61
Tff1Q08423 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tff1Q08423 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.27□□□□□ -0.61
Tff1Q08423 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tff1Q08423 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Tff1Q08423 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Tff1Q08423 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Gm14767-201ENSMUST00000121559 586 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.26□□□□□ -0.61
Tff1Q08423 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tff1Q08423 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tff1Q08423 Gm18187-201ENSMUST00000196476 984 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 Gm44608-201ENSMUST00000206827 855 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 Gm18049-201ENSMUST00000208909 581 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 Gm45453-201ENSMUST00000211758 853 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.26□□□□□ -0.61
Tff1Q08423 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tff1Q08423 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tff1Q08423 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tff1Q08423 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tff1Q08423 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.25□□□□□ -0.61
Tff1Q08423 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms