Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf1Q07802 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf1Q07802 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf1Q07802 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.72□□□□□ -0.21
Ebf1Q07802 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ebf1Q07802 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Gm5187-201ENSMUST00000117317 991 ntBASIC13.72□□□□□ -0.21
Ebf1Q07802 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ebf1Q07802 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.72□□□□□ -0.21
Ebf1Q07802 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.72□□□□□ -0.21
Ebf1Q07802 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.72□□□□□ -0.21
Ebf1Q07802 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ebf1Q07802 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.72□□□□□ -0.21
Ebf1Q07802 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ebf1Q07802 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Ebf1Q07802 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf1Q07802 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ebf1Q07802 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.71□□□□□ -0.21
Ebf1Q07802 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm27514-201ENSMUST00000183692 110 ntBASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm5370-201ENSMUST00000187187 574 ntBASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.71□□□□□ -0.21
Ebf1Q07802 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.71□□□□□ -0.21
Ebf1Q07802 Gm40466-201ENSMUST00000212174 422 ntBASIC13.71□□□□□ -0.21
Ebf1Q07802 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf1Q07802 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ebf1Q07802 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.71□□□□□ -0.21
Ebf1Q07802 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf1Q07802 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf1Q07802 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf1Q07802 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf1Q07802 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Ebf1Q07802 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf1Q07802 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ebf1Q07802 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.71□□□□□ -0.22
Ebf1Q07802 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ebf1Q07802 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf1Q07802 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ebf1Q07802 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf1Q07802 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ebf1Q07802 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.7□□□□□ -0.22
Ebf1Q07802 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf1Q07802 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf1Q07802 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf1Q07802 Gm23931-201ENSMUST00000103842 109 ntBASIC13.7□□□□□ -0.22
Ebf1Q07802 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ebf1Q07802 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.7□□□□□ -0.22
Ebf1Q07802 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf1Q07802 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.7□□□□□ -0.22
Ebf1Q07802 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.7□□□□□ -0.22
Ebf1Q07802 Gm18473-201ENSMUST00000220543 868 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms