Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.17□□□□□ -0.14
Cntn3Q07409 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cntn3Q07409 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm15824-201ENSMUST00000119516 955 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm6266-201ENSMUST00000203844 806 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cntn3Q07409 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.17□□□□□ -0.14
Cntn3Q07409 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.17□□□□□ -0.14
Cntn3Q07409 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cntn3Q07409 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.16□□□□□ -0.14
Cntn3Q07409 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.16□□□□□ -0.14
Cntn3Q07409 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.16□□□□□ -0.14
Cntn3Q07409 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Gm4984-201ENSMUST00000115987 360 ntBASIC14.16□□□□□ -0.14
Cntn3Q07409 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Gm44397-201ENSMUST00000195950 113 ntBASIC14.16□□□□□ -0.14
Cntn3Q07409 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.16□□□□□ -0.14
Cntn3Q07409 Gm7287-201ENSMUST00000205267 602 ntBASIC14.16□□□□□ -0.14
Cntn3Q07409 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cntn3Q07409 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.16□□□□□ -0.14
Cntn3Q07409 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Cntn3Q07409 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cntn3Q07409 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cntn3Q07409 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.15□□□□□ -0.14
Cntn3Q07409 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.15□□□□□ -0.14
Cntn3Q07409 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.15□□□□□ -0.14
Cntn3Q07409 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cntn3Q07409 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cntn3Q07409 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.15□□□□□ -0.14
Cntn3Q07409 Gm27839-201ENSMUST00000184242 106 ntBASIC14.15□□□□□ -0.14
Cntn3Q07409 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.15□□□□□ -0.14
Cntn3Q07409 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.15□□□□□ -0.14
Cntn3Q07409 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cntn3Q07409 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms