Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.31□□□□□ -0.28
Sox4Q06831 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox4Q06831 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox4Q06831 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sox4Q06831 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox4Q06831 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Sox4Q06831 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox4Q06831 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox4Q06831 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.3□□□□□ -0.28
Sox4Q06831 Gm2495-201ENSMUST00000191160 466 ntBASIC13.3□□□□□ -0.28
Sox4Q06831 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.3□□□□□ -0.28
Sox4Q06831 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.3□□□□□ -0.28
Sox4Q06831 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox4Q06831 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.3□□□□□ -0.28
Sox4Q06831 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sox4Q06831 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox4Q06831 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox4Q06831 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox4Q06831 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox4Q06831 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox4Q06831 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Sox4Q06831 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.29□□□□□ -0.28
Sox4Q06831 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.29□□□□□ -0.28
Sox4Q06831 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.29□□□□□ -0.28
Sox4Q06831 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox4Q06831 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Gm6983-201ENSMUST00000214912 628 ntBASIC13.29□□□□□ -0.28
Sox4Q06831 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.29□□□□□ -0.28
Sox4Q06831 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Acot6-202ENSMUST00000222921 3622 ntBASIC13.29□□□□□ -0.28
Sox4Q06831 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.29□□□□□ -0.28
Sox4Q06831 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sox4Q06831 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox4Q06831 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox4Q06831 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.29□□□□□ -0.28
Sox4Q06831 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox4Q06831 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox4Q06831 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.28□□□□□ -0.28
Sox4Q06831 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sox4Q06831 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms