Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrn1P97789 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Xrn1P97789 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC18.8■□□□□ 0.6
Xrn1P97789 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC18.8■□□□□ 0.6
Xrn1P97789 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC18.8■□□□□ 0.6
Xrn1P97789 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Xrn1P97789 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Xrn1P97789 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Xrn1P97789 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC18.8■□□□□ 0.6
Xrn1P97789 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Xrn1P97789 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Xrn1P97789 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Xrn1P97789 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Xrn1P97789 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC18.8■□□□□ 0.6
Xrn1P97789 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC18.8■□□□□ 0.6
Xrn1P97789 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC18.8■□□□□ 0.6
Xrn1P97789 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Gm6652-201ENSMUST00000186414 1070 ntBASIC18.8■□□□□ 0.6
Xrn1P97789 Gm7003-201ENSMUST00000195089 312 ntBASIC18.8■□□□□ 0.6
Xrn1P97789 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrn1P97789 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Xrn1P97789 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Xrn1P97789 Gm20426-201ENSMUST00000173657 440 ntBASIC18.79■□□□□ 0.6
Xrn1P97789 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC18.79■□□□□ 0.6
Xrn1P97789 Gm5369-201ENSMUST00000217499 588 ntBASIC18.79■□□□□ 0.6
Xrn1P97789 Gm18556-201ENSMUST00000219748 1031 ntBASIC18.79■□□□□ 0.6
Xrn1P97789 Dhrs4-202ENSMUST00000226168 828 ntBASIC18.79■□□□□ 0.6
Xrn1P97789 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Xrn1P97789 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrn1P97789 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Xrn1P97789 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Xrn1P97789 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Xrn1P97789 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC18.78■□□□□ 0.6
Xrn1P97789 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Xrn1P97789 Gm6963-201ENSMUST00000147879 379 ntBASIC18.78■□□□□ 0.6
Xrn1P97789 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Xrn1P97789 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Xrn1P97789 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC18.78■□□□□ 0.6
Xrn1P97789 AC154222.2-201ENSMUST00000225848 607 ntBASIC18.78■□□□□ 0.6
Xrn1P97789 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Xrn1P97789 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Mir339-201ENSMUST00000083659 96 ntBASIC18.78■□□□□ 0.6
Xrn1P97789 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.78■□□□□ 0.6
Xrn1P97789 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC18.78■□□□□ 0.6
Xrn1P97789 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC18.78■□□□□ 0.6
Xrn1P97789 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Xrn1P97789 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrn1P97789 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrn1P97789 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC18.77■□□□□ 0.6
Xrn1P97789 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC18.77■□□□□ 0.6
Xrn1P97789 Gm7467-201ENSMUST00000185173 652 ntBASIC18.77■□□□□ 0.6
Xrn1P97789 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC18.77■□□□□ 0.6
Xrn1P97789 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Xrn1P97789 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrn1P97789 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Xrn1P97789 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xrn1P97789 Gm45495-201ENSMUST00000200940 1700 ntBASIC18.77■□□□□ 0.6
Xrn1P97789 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Xrn1P97789 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms