Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm29310-201ENSMUST00000185468 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21825-201ENSMUST00000185728 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm29109-201ENSMUST00000185895 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21896-201ENSMUST00000186520 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21873-201ENSMUST00000186728 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21794-201ENSMUST00000187056 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21880-201ENSMUST00000187275 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21826-201ENSMUST00000187451 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21198-201ENSMUST00000188393 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21749-201ENSMUST00000189343 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21901-201ENSMUST00000189568 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm29424-201ENSMUST00000189716 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm28599-201ENSMUST00000189838 694 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21867-201ENSMUST00000189917 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm29269-201ENSMUST00000190087 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21722-201ENSMUST00000190153 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm28423-201ENSMUST00000190701 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21899-201ENSMUST00000190745 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21910-201ENSMUST00000191163 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21849-201ENSMUST00000191571 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm28678-201ENSMUST00000191593 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm20910-201ENSMUST00000193268 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm21871-201ENSMUST00000194621 696 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.79□□□□□ -0.2
Thumpd3P97770 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Thumpd3P97770 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Thumpd3P97770 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Thumpd3P97770 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.78□□□□□ -0.2
Thumpd3P97770 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Thumpd3P97770 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Gm9719-201ENSMUST00000162765 543 ntBASIC13.78□□□□□ -0.2
Thumpd3P97770 Gm27533-201ENSMUST00000183800 152 ntBASIC13.78□□□□□ -0.2
Thumpd3P97770 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Thumpd3P97770 Gm44344-201ENSMUST00000200287 129 ntBASIC13.78□□□□□ -0.2
Thumpd3P97770 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.78□□□□□ -0.2
Thumpd3P97770 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Thumpd3P97770 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Thumpd3P97770 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Thumpd3P97770 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Thumpd3P97770 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Thumpd3P97770 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Thumpd3P97770 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Thumpd3P97770 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Gm24543-201ENSMUST00000103867 82 ntBASIC13.77□□□□□ -0.21
Thumpd3P97770 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Thumpd3P97770 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Thumpd3P97770 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Thumpd3P97770 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms