Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lig3P97386 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Mir1894-201ENSMUST00000122802 81 ntBASIC14.81□□□□□ -0.04
Lig3P97386 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.81□□□□□ -0.04
Lig3P97386 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.81□□□□□ -0.04
Lig3P97386 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Gm6244-201ENSMUST00000178732 841 ntBASIC14.81□□□□□ -0.04
Lig3P97386 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.81□□□□□ -0.04
Lig3P97386 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.81□□□□□ -0.04
Lig3P97386 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.81□□□□□ -0.04
Lig3P97386 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lig3P97386 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lig3P97386 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Olfr582-201ENSMUST00000098212 960 ntBASIC14.81□□□□□ -0.04
Lig3P97386 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lig3P97386 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.81□□□□□ -0.04
Lig3P97386 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lig3P97386 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
Lig3P97386 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lig3P97386 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig3P97386 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lig3P97386 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lig3P97386 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Gm45784-201ENSMUST00000188360 142 ntBASIC14.8□□□□□ -0.04
Lig3P97386 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.8□□□□□ -0.04
Lig3P97386 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.8□□□□□ -0.04
Lig3P97386 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.8□□□□□ -0.04
Lig3P97386 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.8□□□□□ -0.04
Lig3P97386 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Lig3P97386 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.8□□□□□ -0.04
Lig3P97386 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lig3P97386 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lig3P97386 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig3P97386 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig3P97386 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Lig3P97386 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig3P97386 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lig3P97386 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Lig3P97386 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Gm15393-201ENSMUST00000120499 219 ntBASIC14.79□□□□□ -0.04
Lig3P97386 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Gm9726-201ENSMUST00000180321 678 ntBASIC14.79□□□□□ -0.04
Lig3P97386 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Gm37424-201ENSMUST00000191727 561 ntBASIC14.79□□□□□ -0.04
Lig3P97386 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.79□□□□□ -0.04
Lig3P97386 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Lig3P97386 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Lig3P97386 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig3P97386 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms