Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.71□□□□□ -0.05
Trim43cP86449 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Trim43cP86449 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim43cP86449 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim43cP86449 Gm29608-201ENSMUST00000190444 463 ntBASIC14.71□□□□□ -0.05
Trim43cP86449 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.71□□□□□ -0.05
Trim43cP86449 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim43cP86449 Gm45668-201ENSMUST00000211271 493 ntBASIC14.71□□□□□ -0.05
Trim43cP86449 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.71□□□□□ -0.05
Trim43cP86449 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43cP86449 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43cP86449 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43cP86449 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43cP86449 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43cP86449 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43cP86449 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim43cP86449 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.7□□□□□ -0.06
Trim43cP86449 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Trim43cP86449 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim43cP86449 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim43cP86449 Gm18624-201ENSMUST00000220966 658 ntBASIC14.7□□□□□ -0.06
Trim43cP86449 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trim43cP86449 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.7□□□□□ -0.06
Trim43cP86449 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim43cP86449 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.7□□□□□ -0.06
Trim43cP86449 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43cP86449 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Trim43cP86449 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim43cP86449 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim43cP86449 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Trim43cP86449 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim43cP86449 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Gm19220-201ENSMUST00000222682 803 ntBASIC14.69□□□□□ -0.06
Trim43cP86449 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim43cP86449 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim43cP86449 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim43cP86449 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim43cP86449 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms