Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trim43bP86448 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.95□□□□□ -0.18
Trim43bP86448 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim43bP86448 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim43bP86448 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Trim43bP86448 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim43bP86448 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim43bP86448 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim43bP86448 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.95□□□□□ -0.18
Trim43bP86448 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Gm27321-201ENSMUST00000185021 205 ntBASIC13.95□□□□□ -0.18
Trim43bP86448 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.95□□□□□ -0.18
Trim43bP86448 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim43bP86448 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.95□□□□□ -0.18
Trim43bP86448 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim43bP86448 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim43bP86448 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim43bP86448 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trim43bP86448 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trim43bP86448 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Trim43bP86448 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.94□□□□□ -0.18
Trim43bP86448 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim43bP86448 Gm45453-201ENSMUST00000211758 853 ntBASIC13.94□□□□□ -0.18
Trim43bP86448 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Gm16476-201ENSMUST00000221544 139 ntBASIC13.94□□□□□ -0.18
Trim43bP86448 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim43bP86448 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim43bP86448 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim43bP86448 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim43bP86448 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Trim43bP86448 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Trim43bP86448 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim43bP86448 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim43bP86448 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim43bP86448 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim43bP86448 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms