Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
SgcbP82349 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
SgcbP82349 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SgcbP82349 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SgcbP82349 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
SgcbP82349 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcbP82349 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcbP82349 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcbP82349 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SgcbP82349 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcbP82349 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.08□□□□□ -0.48
SgcbP82349 Gm9908-201ENSMUST00000211534 448 ntBASIC12.08□□□□□ -0.48
SgcbP82349 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcbP82349 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.08□□□□□ -0.48
SgcbP82349 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.08□□□□□ -0.48
SgcbP82349 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SgcbP82349 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SgcbP82349 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.07□□□□□ -0.48
SgcbP82349 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.07□□□□□ -0.48
SgcbP82349 Gm12490-201ENSMUST00000120255 560 ntBASIC12.07□□□□□ -0.48
SgcbP82349 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Gm26464-201ENSMUST00000157094 305 ntBASIC12.07□□□□□ -0.48
SgcbP82349 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Mir7654-201ENSMUST00000185082 70 ntBASIC12.07□□□□□ -0.48
SgcbP82349 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.07□□□□□ -0.48
SgcbP82349 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SgcbP82349 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.07□□□□□ -0.48
SgcbP82349 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.07□□□□□ -0.48
SgcbP82349 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SgcbP82349 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SgcbP82349 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SgcbP82349 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SgcbP82349 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
SgcbP82349 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SgcbP82349 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SgcbP82349 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SgcbP82349 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.06□□□□□ -0.48
SgcbP82349 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms