Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm28678-201ENSMUST00000191593 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Shox2P70390 Gm20910-201ENSMUST00000193268 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.37□□□□□ -0.27
Shox2P70390 Gm21871-201ENSMUST00000194621 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 AA619741-201ENSMUST00000195095 646 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.37□□□□□ -0.27
Shox2P70390 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Shox2P70390 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Shox2P70390 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Shox2P70390 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.36□□□□□ -0.27
Shox2P70390 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Shox2P70390 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.36□□□□□ -0.27
Shox2P70390 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Shox2P70390 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Shox2P70390 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Shox2P70390 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Shox2P70390 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.36□□□□□ -0.27
Shox2P70390 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.36□□□□□ -0.27
Shox2P70390 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.36□□□□□ -0.27
Shox2P70390 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.36□□□□□ -0.27
Shox2P70390 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shox2P70390 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.35□□□□□ -0.27
Shox2P70390 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shox2P70390 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shox2P70390 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Shox2P70390 Gm7153-201ENSMUST00000117092 455 ntBASIC13.35□□□□□ -0.27
Shox2P70390 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.35□□□□□ -0.27
Shox2P70390 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shox2P70390 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Shox2P70390 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Shox2P70390 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.35□□□□□ -0.27
Shox2P70390 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.35□□□□□ -0.27
Shox2P70390 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shox2P70390 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.35□□□□□ -0.27
Shox2P70390 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shox2P70390 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Shox2P70390 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shox2P70390 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shox2P70390 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms