Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.68□□□□□ -0.38
Six5P70178 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.68□□□□□ -0.38
Six5P70178 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Six5P70178 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.68□□□□□ -0.38
Six5P70178 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Six5P70178 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.67□□□□□ -0.38
Six5P70178 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.67□□□□□ -0.38
Six5P70178 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.67□□□□□ -0.38
Six5P70178 Gm6218-201ENSMUST00000219812 628 ntBASIC12.67□□□□□ -0.38
Six5P70178 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Six5P70178 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Six5P70178 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Syt7-205ENSMUST00000224135 1557 ntBASIC12.67□□□□□ -0.38
Six5P70178 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Six5P70178 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.67□□□□□ -0.38
Six5P70178 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Six5P70178 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.66□□□□□ -0.38
Six5P70178 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.66□□□□□ -0.38
Six5P70178 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Six5P70178 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Gm25925-201ENSMUST00000158314 306 ntBASIC12.66□□□□□ -0.38
Six5P70178 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Gm38144-201ENSMUST00000192790 465 ntBASIC12.66□□□□□ -0.38
Six5P70178 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.66□□□□□ -0.38
Six5P70178 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Six5P70178 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Six5P70178 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.66□□□□□ -0.38
Six5P70178 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Six5P70178 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms