Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Lhx1P63006 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Lhx1P63006 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.28□□□□□ -0.28
Lhx1P63006 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lhx1P63006 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Lhx1P63006 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Lhx1P63006 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lhx1P63006 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Lhx1P63006 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.27□□□□□ -0.28
Lhx1P63006 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.27□□□□□ -0.28
Lhx1P63006 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.27□□□□□ -0.28
Lhx1P63006 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lhx1P63006 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lhx1P63006 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Lhx1P63006 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.27□□□□□ -0.29
Lhx1P63006 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.27□□□□□ -0.29
Lhx1P63006 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Lhx1P63006 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lhx1P63006 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.27□□□□□ -0.29
Lhx1P63006 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Lhx1P63006 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.27□□□□□ -0.29
Lhx1P63006 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Lhx1P63006 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lhx1P63006 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Lhx1P63006 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Lhx1P63006 Gm13829-201ENSMUST00000119600 138 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.26□□□□□ -0.29
Lhx1P63006 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Lhx1P63006 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Gm8652-201ENSMUST00000181363 964 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Gm27847-201ENSMUST00000183711 107 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Gm27375-201ENSMUST00000183799 107 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.26□□□□□ -0.29
Lhx1P63006 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.26□□□□□ -0.29
Lhx1P63006 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.26□□□□□ -0.29
Lhx1P63006 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lhx1P63006 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.26□□□□□ -0.29
Lhx1P63006 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms