Protein–RNA interactions for Protein: P61961

Ufm1, Ubiquitin-fold modifier 1, mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufm1P61961 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.99□□□□□ -0.33
Ufm1P61961 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.99□□□□□ -0.33
Ufm1P61961 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Gm11594-201ENSMUST00000122313 162 ntBASIC12.99□□□□□ -0.33
Ufm1P61961 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ufm1P61961 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
Ufm1P61961 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.99□□□□□ -0.33
Ufm1P61961 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ufm1P61961 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ufm1P61961 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.99□□□□□ -0.33
Ufm1P61961 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.99□□□□□ -0.33
Ufm1P61961 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ufm1P61961 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ufm1P61961 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ufm1P61961 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm8410-201ENSMUST00000117225 605 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Gm15653-201ENSMUST00000119247 907 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ufm1P61961 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm27622-201ENSMUST00000183779 60 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Gm27533-201ENSMUST00000183800 152 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Gm7774-201ENSMUST00000200064 533 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Gm46209-201ENSMUST00000217912 553 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Gm9229-201ENSMUST00000222777 126 ntBASIC12.98□□□□□ -0.33
Ufm1P61961 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ufm1P61961 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ufm1P61961 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ufm1P61961 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ufm1P61961 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ufm1P61961 Gm15693-201ENSMUST00000120470 637 ntBASIC12.97□□□□□ -0.33
Ufm1P61961 Gm14822-201ENSMUST00000122247 291 ntBASIC12.97□□□□□ -0.33
Ufm1P61961 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ufm1P61961 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms