Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.09■□□□□ 0.01
Tpm1P58771 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Mir3113-201ENSMUST00000175478 76 ntBASIC15.09■□□□□ 0.01
Tpm1P58771 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Gm20553-201ENSMUST00000204205 844 ntBASIC15.09■□□□□ 0.01
Tpm1P58771 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tpm1P58771 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.09■□□□□ 0.01
Tpm1P58771 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.09■□□□□ 0.01
Tpm1P58771 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tpm1P58771 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tpm1P58771 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tpm1P58771 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tpm1P58771 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tpm1P58771 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tpm1P58771 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tpm1P58771 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.08■□□□□ 0.01
Tpm1P58771 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.08■□□□□ 0
Tpm1P58771 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.08■□□□□ 0
Tpm1P58771 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.08■□□□□ 0
Tpm1P58771 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.08■□□□□ 0
Tpm1P58771 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tpm1P58771 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.08■□□□□ 0
Tpm1P58771 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.08■□□□□ 0
Tpm1P58771 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Tpm1P58771 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tpm1P58771 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tpm1P58771 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Tpm1P58771 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.07■□□□□ 0
Tpm1P58771 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.07■□□□□ 0
Tpm1P58771 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Tpm1P58771 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.07■□□□□ 0
Tpm1P58771 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.07■□□□□ 0
Tpm1P58771 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tpm1P58771 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tpm1P58771 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms