Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Abcd3P55096 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Abcd3P55096 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Abcd3P55096 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Abcd3P55096 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Abcd3P55096 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Abcd3P55096 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Abcd3P55096 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.12□□□□□ -0.47
Abcd3P55096 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Abcd3P55096 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Abcd3P55096 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.12□□□□□ -0.47
Abcd3P55096 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.12□□□□□ -0.47
Abcd3P55096 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.12□□□□□ -0.47
Abcd3P55096 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.12□□□□□ -0.47
Abcd3P55096 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.12□□□□□ -0.47
Abcd3P55096 Gm29667-201ENSMUST00000190817 490 ntBASIC12.12□□□□□ -0.47
Abcd3P55096 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.12□□□□□ -0.47
Abcd3P55096 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.12□□□□□ -0.47
Abcd3P55096 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Abcd3P55096 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Abcd3P55096 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Abcd3P55096 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Abcd3P55096 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Abcd3P55096 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.11□□□□□ -0.47
Abcd3P55096 Gm14719-201ENSMUST00000121891 340 ntBASIC12.11□□□□□ -0.47
Abcd3P55096 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Abcd3P55096 Gm24694-201ENSMUST00000180054 110 ntBASIC12.11□□□□□ -0.47
Abcd3P55096 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Gm27663-201ENSMUST00000184839 110 ntBASIC12.11□□□□□ -0.47
Abcd3P55096 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.11□□□□□ -0.47
Abcd3P55096 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Abcd3P55096 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Abcd3P55096 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Abcd3P55096 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Abcd3P55096 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Abcd3P55096 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.1□□□□□ -0.47
Abcd3P55096 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Abcd3P55096 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms