Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.59□□□□□ -0.07
Nub1P54729 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.59□□□□□ -0.07
Nub1P54729 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nub1P54729 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.59□□□□□ -0.07
Nub1P54729 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.59□□□□□ -0.07
Nub1P54729 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.59□□□□□ -0.07
Nub1P54729 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.59□□□□□ -0.07
Nub1P54729 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Nub1P54729 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nub1P54729 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Nub1P54729 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.59□□□□□ -0.07
Nub1P54729 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nub1P54729 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nub1P54729 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nub1P54729 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nub1P54729 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nub1P54729 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nub1P54729 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.58□□□□□ -0.08
Nub1P54729 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.58□□□□□ -0.08
Nub1P54729 Gm15376-201ENSMUST00000122258 783 ntBASIC14.58□□□□□ -0.08
Nub1P54729 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.58□□□□□ -0.08
Nub1P54729 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nub1P54729 Gm5354-201ENSMUST00000182417 973 ntBASIC14.58□□□□□ -0.08
Nub1P54729 Gm28631-201ENSMUST00000190740 334 ntBASIC14.58□□□□□ -0.08
Nub1P54729 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nub1P54729 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nub1P54729 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nub1P54729 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nub1P54729 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.58□□□□□ -0.08
Nub1P54729 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nub1P54729 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nub1P54729 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.57□□□□□ -0.08
Nub1P54729 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nub1P54729 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.57□□□□□ -0.08
Nub1P54729 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.57□□□□□ -0.08
Nub1P54729 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Nub1P54729 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nub1P54729 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.57□□□□□ -0.08
Nub1P54729 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.57□□□□□ -0.08
Nub1P54729 Gm19078-201ENSMUST00000206311 727 ntBASIC14.57□□□□□ -0.08
Nub1P54729 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.57□□□□□ -0.08
Nub1P54729 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.57□□□□□ -0.08
Nub1P54729 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.57□□□□□ -0.08
Nub1P54729 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.57□□□□□ -0.08
Nub1P54729 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.57□□□□□ -0.08
Nub1P54729 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.57□□□□□ -0.08
Nub1P54729 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.57□□□□□ -0.08
Nub1P54729 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nub1P54729 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nub1P54729 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.56□□□□□ -0.08
Nub1P54729 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nub1P54729 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nub1P54729 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nub1P54729 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Nub1P54729 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nub1P54729 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms