Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Msh6P54276 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Gm6621-201ENSMUST00000193251 772 ntBASIC17.03■□□□□ 0.32
Msh6P54276 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.03■□□□□ 0.32
Msh6P54276 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.03■□□□□ 0.32
Msh6P54276 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.03■□□□□ 0.32
Msh6P54276 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Msh6P54276 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.03■□□□□ 0.32
Msh6P54276 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Msh6P54276 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh6P54276 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.02■□□□□ 0.32
Msh6P54276 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Mir7070-201ENSMUST00000183657 86 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.02■□□□□ 0.32
Msh6P54276 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Msh6P54276 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Gm7046-201ENSMUST00000221351 977 ntBASIC17.02■□□□□ 0.32
Msh6P54276 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Msh6P54276 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.02■□□□□ 0.32
Msh6P54276 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Msh6P54276 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.02■□□□□ 0.31
Msh6P54276 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh6P54276 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh6P54276 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh6P54276 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Msh6P54276 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh6P54276 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh6P54276 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Msh6P54276 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Msh6P54276 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Msh6P54276 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Msh6P54276 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Msh6P54276 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Msh6P54276 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh6P54276 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.02■□□□□ 0.31
Msh6P54276 Gm2991-201ENSMUST00000173338 480 ntBASIC17.02■□□□□ 0.31
Msh6P54276 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Msh6P54276 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.01■□□□□ 0.31
Msh6P54276 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.01■□□□□ 0.31
Msh6P54276 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.01■□□□□ 0.31
Msh6P54276 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.01■□□□□ 0.31
Msh6P54276 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Gm11591-201ENSMUST00000120063 702 ntBASIC17.01■□□□□ 0.31
Msh6P54276 Gm13297-201ENSMUST00000120205 934 ntBASIC17.01■□□□□ 0.31
Msh6P54276 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.01■□□□□ 0.31
Msh6P54276 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Msh6P54276 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.01■□□□□ 0.31
Msh6P54276 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.01■□□□□ 0.31
Msh6P54276 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Msh6P54276 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Msh6P54276 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Msh6P54276 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17■□□□□ 0.31
Msh6P54276 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms