Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.21□□□□□ -0.61
Nkx2-1P50220 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx2-1P50220 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.2□□□□□ -0.62
Nkx2-1P50220 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx2-1P50220 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.19□□□□□ -0.62
Nkx2-1P50220 Gm11779-201ENSMUST00000118541 368 ntBASIC11.19□□□□□ -0.62
Nkx2-1P50220 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Rpph1-201ENSMUST00000175096 319 ntBASIC11.19□□□□□ -0.62
Nkx2-1P50220 Gm8000-201ENSMUST00000188378 592 ntBASIC11.19□□□□□ -0.62
Nkx2-1P50220 Gm43514-201ENSMUST00000198852 424 ntBASIC11.19□□□□□ -0.62
Nkx2-1P50220 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.19□□□□□ -0.62
Nkx2-1P50220 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.19□□□□□ -0.62
Nkx2-1P50220 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms