Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Brca1P48754 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Brca1P48754 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Brca1P48754 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Brca1P48754 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.89□□□□□ -0.03
Brca1P48754 Gm20426-201ENSMUST00000173657 440 ntBASIC14.89□□□□□ -0.03
Brca1P48754 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.89□□□□□ -0.03
Brca1P48754 Gm27438-201ENSMUST00000183480 110 ntBASIC14.89□□□□□ -0.03
Brca1P48754 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.89□□□□□ -0.03
Brca1P48754 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Brca1P48754 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Brca1P48754 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.89□□□□□ -0.03
Brca1P48754 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Brca1P48754 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.89□□□□□ -0.03
Brca1P48754 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Brca1P48754 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Gm13875-201ENSMUST00000120162 282 ntBASIC14.89□□□□□ -0.03
Brca1P48754 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Gm9550-201ENSMUST00000161130 862 ntBASIC14.89□□□□□ -0.03
Brca1P48754 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.89□□□□□ -0.03
Brca1P48754 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Brca1P48754 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Brca1P48754 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Brca1P48754 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Brca1P48754 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brca1P48754 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Brca1P48754 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Brca1P48754 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Brca1P48754 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Brca1P48754 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Gm13492-201ENSMUST00000119772 665 ntBASIC14.88□□□□□ -0.03
Brca1P48754 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.88□□□□□ -0.03
Brca1P48754 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.88□□□□□ -0.03
Brca1P48754 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.88□□□□□ -0.03
Brca1P48754 Gm5950-201ENSMUST00000213337 772 ntBASIC14.88□□□□□ -0.03
Brca1P48754 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.88□□□□□ -0.03
Brca1P48754 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.88□□□□□ -0.03
Brca1P48754 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Brca1P48754 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Brca1P48754 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.87□□□□□ -0.03
Brca1P48754 Gm8566-201ENSMUST00000120174 465 ntBASIC14.87□□□□□ -0.03
Brca1P48754 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Gm24749-201ENSMUST00000157838 343 ntBASIC14.87□□□□□ -0.03
Brca1P48754 Gm2546-201ENSMUST00000182630 991 ntBASIC14.87□□□□□ -0.03
Brca1P48754 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms