Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm13823-201ENSMUST00000119930 345 ntBASIC11.89□□□□□ -0.51
GdnfP48540 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.89□□□□□ -0.51
GdnfP48540 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.89□□□□□ -0.51
GdnfP48540 Gm9824-201ENSMUST00000178707 561 ntBASIC11.89□□□□□ -0.51
GdnfP48540 Gm18766-201ENSMUST00000189811 808 ntBASIC11.89□□□□□ -0.51
GdnfP48540 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.89□□□□□ -0.51
GdnfP48540 Gm5867-201ENSMUST00000063197 592 ntBASIC11.89□□□□□ -0.51
GdnfP48540 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
GdnfP48540 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.89□□□□□ -0.51
GdnfP48540 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
GdnfP48540 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
GdnfP48540 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
GdnfP48540 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
GdnfP48540 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
GdnfP48540 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.89□□□□□ -0.51
GdnfP48540 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.88□□□□□ -0.51
GdnfP48540 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.88□□□□□ -0.51
GdnfP48540 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.88□□□□□ -0.51
GdnfP48540 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.88□□□□□ -0.51
GdnfP48540 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
GdnfP48540 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.88□□□□□ -0.51
GdnfP48540 Mir449b-201ENSMUST00000104833 80 ntBASIC11.88□□□□□ -0.51
GdnfP48540 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
GdnfP48540 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
GdnfP48540 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.88□□□□□ -0.51
GdnfP48540 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.88□□□□□ -0.51
GdnfP48540 Gm24158-201ENSMUST00000175263 71 ntBASIC11.88□□□□□ -0.51
GdnfP48540 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
GdnfP48540 Gm7774-201ENSMUST00000200064 533 ntBASIC11.88□□□□□ -0.51
GdnfP48540 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.88□□□□□ -0.51
GdnfP48540 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
GdnfP48540 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
GdnfP48540 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
GdnfP48540 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.87□□□□□ -0.51
GdnfP48540 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
GdnfP48540 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.87□□□□□ -0.51
GdnfP48540 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.87□□□□□ -0.51
GdnfP48540 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.87□□□□□ -0.51
GdnfP48540 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.87□□□□□ -0.51
GdnfP48540 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
GdnfP48540 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
GdnfP48540 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms