Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfx3P48381 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.25□□□□□ -0.45
Rfx3P48381 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfx3P48381 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.25□□□□□ -0.45
Rfx3P48381 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.25□□□□□ -0.45
Rfx3P48381 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfx3P48381 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Gm27533-201ENSMUST00000183800 152 ntBASIC12.24□□□□□ -0.45
Rfx3P48381 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.24□□□□□ -0.45
Rfx3P48381 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.24□□□□□ -0.45
Rfx3P48381 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rfx3P48381 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Rfx3P48381 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rfx3P48381 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rfx3P48381 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rfx3P48381 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rfx3P48381 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.23□□□□□ -0.45
Rfx3P48381 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Rfx3P48381 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.23□□□□□ -0.45
Rfx3P48381 Gm15460-201ENSMUST00000118147 391 ntBASIC12.23□□□□□ -0.45
Rfx3P48381 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.23□□□□□ -0.45
Rfx3P48381 Gm22175-201ENSMUST00000175007 78 ntBASIC12.23□□□□□ -0.45
Rfx3P48381 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.23□□□□□ -0.45
Rfx3P48381 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.23□□□□□ -0.45
Rfx3P48381 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.23□□□□□ -0.45
Rfx3P48381 Gm9229-201ENSMUST00000222777 126 ntBASIC12.23□□□□□ -0.45
Rfx3P48381 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.23□□□□□ -0.45
Rfx3P48381 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rfx3P48381 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Rfx3P48381 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.22□□□□□ -0.45
Rfx3P48381 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rfx3P48381 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfx3P48381 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms