Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Nupl1-206ENSMUST00000225111 2936 ntBASIC8.74□□□□□ -1.01
Xcl1P47993 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Xcl1P47993 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Gm29100-201ENSMUST00000187564 4410 ntBASIC8.73□□□□□ -1.01
Xcl1P47993 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Gm10849-201ENSMUST00000100397 618 ntBASIC8.73□□□□□ -1.01
Xcl1P47993 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Mir1199-201ENSMUST00000117015 119 ntBASIC8.73□□□□□ -1.01
Xcl1P47993 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Xcl1P47993 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Xcl1P47993 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Gm6944-201ENSMUST00000182449 1006 ntBASIC8.73□□□□□ -1.01
Xcl1P47993 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC8.73□□□□□ -1.01
Xcl1P47993 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Xcl1P47993 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Xcl1P47993 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Xcl1P47993 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Gm38376-201ENSMUST00000195493 2253 ntBASIC8.73□□□□□ -1.01
Xcl1P47993 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Xcl1P47993 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.72□□□□□ -1.01
Xcl1P47993 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Xcl1P47993 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Xcl1P47993 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 AC151895.1-201ENSMUST00000219025 1742 ntBASIC8.72□□□□□ -1.01
Xcl1P47993 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
Xcl1P47993 Gm15593-201ENSMUST00000122085 1008 ntBASIC8.72□□□□□ -1.01
Xcl1P47993 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Gm2445-201ENSMUST00000182798 989 ntBASIC8.72□□□□□ -1.01
Xcl1P47993 Gm3375-201ENSMUST00000203929 796 ntBASIC8.72□□□□□ -1.01
Xcl1P47993 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Xcl1P47993 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Xcl1P47993 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Xcl1P47993 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms