Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps4bP46467 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vps4bP46467 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps4bP46467 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vps4bP46467 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.75□□□□□ -0.21
Vps4bP46467 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.75□□□□□ -0.21
Vps4bP46467 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Gm14767-201ENSMUST00000121559 586 ntBASIC13.75□□□□□ -0.21
Vps4bP46467 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.75□□□□□ -0.21
Vps4bP46467 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.75□□□□□ -0.21
Vps4bP46467 Gm27437-201ENSMUST00000183429 107 ntBASIC13.75□□□□□ -0.21
Vps4bP46467 Gm44344-201ENSMUST00000200287 129 ntBASIC13.75□□□□□ -0.21
Vps4bP46467 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.75□□□□□ -0.21
Vps4bP46467 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vps4bP46467 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps4bP46467 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vps4bP46467 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps4bP46467 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.74□□□□□ -0.21
Vps4bP46467 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4bP46467 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4bP46467 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4bP46467 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps4bP46467 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4bP46467 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps4bP46467 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps4bP46467 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Grk6-205ENSMUST00000224653 2976 ntBASIC13.74□□□□□ -0.21
Vps4bP46467 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps4bP46467 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.73□□□□□ -0.21
Vps4bP46467 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vps4bP46467 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps4bP46467 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.73□□□□□ -0.21
Vps4bP46467 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.73□□□□□ -0.21
Vps4bP46467 Gm27680-201ENSMUST00000184192 160 ntBASIC13.73□□□□□ -0.21
Vps4bP46467 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps4bP46467 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.73□□□□□ -0.21
Vps4bP46467 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps4bP46467 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps4bP46467 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.73□□□□□ -0.21
Vps4bP46467 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vps4bP46467 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps4bP46467 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms