Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm12859-201ENSMUST00000117834 427 ntBASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm5866-201ENSMUST00000177881 973 ntBASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.41□□□□□ -0.42
Nkx2-2P42586 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx2-2P42586 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.4□□□□□ -0.42
Nkx2-2P42586 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.4□□□□□ -0.42
Nkx2-2P42586 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nkx2-2P42586 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-2P42586 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-2P42586 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nkx2-2P42586 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Nkx2-2P42586 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-2P42586 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms