Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.12□□□□□ -0.63
Timp3P39876 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.12□□□□□ -0.63
Timp3P39876 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Timp3P39876 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Timp3P39876 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Timp3P39876 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Timp3P39876 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.12□□□□□ -0.63
Timp3P39876 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Timp3P39876 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Timp3P39876 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.11□□□□□ -0.63
Timp3P39876 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Gm15240-201ENSMUST00000118156 720 ntBASIC11.11□□□□□ -0.63
Timp3P39876 Gm12138-201ENSMUST00000122180 951 ntBASIC11.11□□□□□ -0.63
Timp3P39876 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Gm24420-201ENSMUST00000176676 59 ntBASIC11.11□□□□□ -0.63
Timp3P39876 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Mir7654-201ENSMUST00000185082 70 ntBASIC11.11□□□□□ -0.63
Timp3P39876 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Timp3P39876 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.11□□□□□ -0.63
Timp3P39876 Gm18307-201ENSMUST00000206864 949 ntBASIC11.11□□□□□ -0.63
Timp3P39876 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.11□□□□□ -0.63
Timp3P39876 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.11□□□□□ -0.63
Timp3P39876 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.11□□□□□ -0.63
Timp3P39876 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Timp3P39876 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.11□□□□□ -0.63
Timp3P39876 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Timp3P39876 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Timp3P39876 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.11□□□□□ -0.63
Timp3P39876 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Timp3P39876 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Timp3P39876 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Timp3P39876 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Timp3P39876 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms