Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Mmp13P33435 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Mmp13P33435 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Mmp13P33435 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Mmp13P33435 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Mmp13P33435 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Mmp13P33435 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.87□□□□□ -0.19
Mmp13P33435 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Mmp13P33435 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.87□□□□□ -0.19
Mmp13P33435 Gm7775-201ENSMUST00000218871 853 ntBASIC13.87□□□□□ -0.19
Mmp13P33435 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.87□□□□□ -0.19
Mmp13P33435 Gm9229-201ENSMUST00000222777 126 ntBASIC13.87□□□□□ -0.19
Mmp13P33435 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.87□□□□□ -0.19
Mmp13P33435 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Mmp13P33435 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Mmp13P33435 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Mmp13P33435 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Mmp13P33435 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Mmp13P33435 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.86□□□□□ -0.19
Mmp13P33435 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Gm12428-201ENSMUST00000119844 727 ntBASIC13.86□□□□□ -0.19
Mmp13P33435 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Mmp13P33435 Gm3436-201ENSMUST00000179930 840 ntBASIC13.86□□□□□ -0.19
Mmp13P33435 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Mir497b-201ENSMUST00000093601 125 ntBASIC13.86□□□□□ -0.19
Mmp13P33435 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.86□□□□□ -0.19
Mmp13P33435 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Mmp13P33435 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Mmp13P33435 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Mmp13P33435 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.86□□□□□ -0.19
Mmp13P33435 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp13P33435 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.85□□□□□ -0.19
Mmp13P33435 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms