Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nedd8P29595 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.47□□□□□ -0.41
Nedd8P29595 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nedd8P29595 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.47□□□□□ -0.41
Nedd8P29595 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.47□□□□□ -0.41
Nedd8P29595 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.47□□□□□ -0.41
Nedd8P29595 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.46□□□□□ -0.41
Nedd8P29595 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Nedd8P29595 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.46□□□□□ -0.41
Nedd8P29595 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.46□□□□□ -0.41
Nedd8P29595 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nedd8P29595 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.46□□□□□ -0.42
Nedd8P29595 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Nedd8P29595 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nedd8P29595 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nedd8P29595 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.46□□□□□ -0.42
Nedd8P29595 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nedd8P29595 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.45□□□□□ -0.42
Nedd8P29595 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.45□□□□□ -0.42
Nedd8P29595 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Nedd8P29595 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm25990-201ENSMUST00000102440 86 ntBASIC12.45□□□□□ -0.42
Nedd8P29595 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.45□□□□□ -0.42
Nedd8P29595 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm10231-201ENSMUST00000181584 441 ntBASIC12.45□□□□□ -0.42
Nedd8P29595 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm2272-201ENSMUST00000194903 582 ntBASIC12.45□□□□□ -0.42
Nedd8P29595 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.45□□□□□ -0.42
Nedd8P29595 Gm44608-201ENSMUST00000206827 855 ntBASIC12.45□□□□□ -0.42
Nedd8P29595 Gm10175-202ENSMUST00000208752 441 ntBASIC12.45□□□□□ -0.42
Nedd8P29595 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms