Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl6P27784 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl6P27784 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.56□□□□□ -0.72
Ccl6P27784 Gm13385-201ENSMUST00000121089 220 ntBASIC10.56□□□□□ -0.72
Ccl6P27784 Gm15487-201ENSMUST00000122373 465 ntBASIC10.56□□□□□ -0.72
Ccl6P27784 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Ccl6P27784 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl6P27784 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl6P27784 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.56□□□□□ -0.72
Ccl6P27784 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccl6P27784 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.56□□□□□ -0.72
Ccl6P27784 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.56□□□□□ -0.72
Ccl6P27784 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.56□□□□□ -0.72
Ccl6P27784 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccl6P27784 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.56□□□□□ -0.72
Ccl6P27784 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ccl6P27784 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl6P27784 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl6P27784 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Ccl6P27784 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.55□□□□□ -0.72
Ccl6P27784 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.55□□□□□ -0.72
Ccl6P27784 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccl6P27784 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccl6P27784 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Gm27306-201ENSMUST00000183970 107 ntBASIC10.55□□□□□ -0.72
Ccl6P27784 Gm10766-202ENSMUST00000194123 606 ntBASIC10.55□□□□□ -0.72
Ccl6P27784 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.55□□□□□ -0.72
Ccl6P27784 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccl6P27784 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccl6P27784 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Ccl6P27784 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl6P27784 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms