Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cbx3P23198 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cbx3P23198 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Cbx3P23198 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cbx3P23198 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.31□□□□□ -0.44
Cbx3P23198 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.31□□□□□ -0.44
Cbx3P23198 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.31□□□□□ -0.44
Cbx3P23198 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.31□□□□□ -0.44
Cbx3P23198 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.31□□□□□ -0.44
Cbx3P23198 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.31□□□□□ -0.44
Cbx3P23198 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.31□□□□□ -0.44
Cbx3P23198 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.31□□□□□ -0.44
Cbx3P23198 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cbx3P23198 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.31□□□□□ -0.44
Cbx3P23198 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cbx3P23198 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cbx3P23198 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.31□□□□□ -0.44
Cbx3P23198 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cbx3P23198 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.3□□□□□ -0.44
Cbx3P23198 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.3□□□□□ -0.44
Cbx3P23198 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cbx3P23198 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cbx3P23198 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.3□□□□□ -0.44
Cbx3P23198 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.3□□□□□ -0.44
Cbx3P23198 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.3□□□□□ -0.44
Cbx3P23198 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.3□□□□□ -0.44
Cbx3P23198 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.3□□□□□ -0.44
Cbx3P23198 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.3□□□□□ -0.44
Cbx3P23198 Gm6376-201ENSMUST00000209407 580 ntBASIC12.3□□□□□ -0.44
Cbx3P23198 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.3□□□□□ -0.44
Cbx3P23198 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Cbx3P23198 Rps4l-201ENSMUST00000071745 943 ntBASIC12.3□□□□□ -0.44
Cbx3P23198 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cbx3P23198 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.3□□□□□ -0.44
Cbx3P23198 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cbx3P23198 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms