Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.78□□□□□ -0.52
UbbP0CG49 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UbbP0CG49 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.78□□□□□ -0.52
UbbP0CG49 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
UbbP0CG49 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.78□□□□□ -0.52
UbbP0CG49 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UbbP0CG49 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UbbP0CG49 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.78□□□□□ -0.52
UbbP0CG49 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.77□□□□□ -0.52
UbbP0CG49 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
UbbP0CG49 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
UbbP0CG49 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UbbP0CG49 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UbbP0CG49 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Mir1895-201ENSMUST00000122615 79 ntBASIC11.77□□□□□ -0.53
UbbP0CG49 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.77□□□□□ -0.53
UbbP0CG49 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Gm9719-201ENSMUST00000162765 543 ntBASIC11.77□□□□□ -0.53
UbbP0CG49 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UbbP0CG49 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.77□□□□□ -0.53
UbbP0CG49 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UbbP0CG49 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
UbbP0CG49 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.76□□□□□ -0.53
UbbP0CG49 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UbbP0CG49 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.76□□□□□ -0.53
UbbP0CG49 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UbbP0CG49 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UbbP0CG49 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Gm13015-201ENSMUST00000118674 204 ntBASIC11.76□□□□□ -0.53
UbbP0CG49 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UbbP0CG49 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.76□□□□□ -0.53
UbbP0CG49 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Gm27494-201ENSMUST00000184735 189 ntBASIC11.76□□□□□ -0.53
UbbP0CG49 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UbbP0CG49 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.76□□□□□ -0.53
UbbP0CG49 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
UbbP0CG49 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UbbP0CG49 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms