Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.33□□□□□ -0.12
TnfP06804 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.33□□□□□ -0.12
TnfP06804 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.33□□□□□ -0.12
TnfP06804 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TnfP06804 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TnfP06804 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TnfP06804 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TnfP06804 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
TnfP06804 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TnfP06804 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TnfP06804 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TnfP06804 Gm43818-201ENSMUST00000200605 466 ntBASIC14.32□□□□□ -0.12
TnfP06804 Gm40466-201ENSMUST00000212174 422 ntBASIC14.32□□□□□ -0.12
TnfP06804 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.32□□□□□ -0.12
TnfP06804 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.32□□□□□ -0.12
TnfP06804 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TnfP06804 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TnfP06804 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TnfP06804 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.31□□□□□ -0.12
TnfP06804 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TnfP06804 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.31□□□□□ -0.12
TnfP06804 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.31□□□□□ -0.12
TnfP06804 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.31□□□□□ -0.12
TnfP06804 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Gm12742-201ENSMUST00000117326 410 ntBASIC14.31□□□□□ -0.12
TnfP06804 Gm16177-201ENSMUST00000120728 718 ntBASIC14.31□□□□□ -0.12
TnfP06804 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Gm27331-201ENSMUST00000183705 60 ntBASIC14.31□□□□□ -0.12
TnfP06804 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.31□□□□□ -0.12
TnfP06804 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.31□□□□□ -0.12
TnfP06804 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.31□□□□□ -0.12
TnfP06804 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
TnfP06804 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TnfP06804 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.31□□□□□ -0.12
TnfP06804 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.31□□□□□ -0.12
TnfP06804 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.31□□□□□ -0.12
TnfP06804 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TnfP06804 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TnfP06804 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TnfP06804 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.31□□□□□ -0.12
TnfP06804 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TnfP06804 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TnfP06804 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TnfP06804 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TnfP06804 Gm12957-201ENSMUST00000117835 377 ntBASIC14.3□□□□□ -0.12
TnfP06804 Gm12203-201ENSMUST00000118235 598 ntBASIC14.3□□□□□ -0.12
TnfP06804 Gm12209-201ENSMUST00000120089 596 ntBASIC14.3□□□□□ -0.12
TnfP06804 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms