Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrnpP04925 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrnpP04925 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
PrnpP04925 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PrnpP04925 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrnpP04925 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PrnpP04925 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrnpP04925 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PrnpP04925 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrnpP04925 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrnpP04925 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
PrnpP04925 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrnpP04925 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
PrnpP04925 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.96□□□□□ -0.18
PrnpP04925 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrnpP04925 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PrnpP04925 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PrnpP04925 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PrnpP04925 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PrnpP04925 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.95□□□□□ -0.18
PrnpP04925 Gm15236-201ENSMUST00000117309 379 ntBASIC13.95□□□□□ -0.18
PrnpP04925 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.95□□□□□ -0.18
PrnpP04925 Gm11591-201ENSMUST00000120063 702 ntBASIC13.95□□□□□ -0.18
PrnpP04925 Gm16479-201ENSMUST00000121706 932 ntBASIC13.95□□□□□ -0.18
PrnpP04925 Gm26185-201ENSMUST00000157692 266 ntBASIC13.95□□□□□ -0.18
PrnpP04925 Gm26083-201ENSMUST00000157904 193 ntBASIC13.95□□□□□ -0.18
PrnpP04925 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
PrnpP04925 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PrnpP04925 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.95□□□□□ -0.18
PrnpP04925 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.95□□□□□ -0.18
PrnpP04925 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PrnpP04925 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.95□□□□□ -0.18
PrnpP04925 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.94□□□□□ -0.18
PrnpP04925 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PrnpP04925 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PrnpP04925 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PrnpP04925 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PrnpP04925 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PrnpP04925 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PrnpP04925 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PrnpP04925 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PrnpP04925 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PrnpP04925 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Gm18056-201ENSMUST00000207670 568 ntBASIC13.94□□□□□ -0.18
PrnpP04925 Gm18061-201ENSMUST00000208350 562 ntBASIC13.94□□□□□ -0.18
PrnpP04925 Gm18063-201ENSMUST00000208529 568 ntBASIC13.94□□□□□ -0.18
PrnpP04925 Gm18052-201ENSMUST00000208750 559 ntBASIC13.94□□□□□ -0.18
PrnpP04925 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.94□□□□□ -0.18
PrnpP04925 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.94□□□□□ -0.18
PrnpP04925 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.94□□□□□ -0.18
PrnpP04925 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.94□□□□□ -0.18
PrnpP04925 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.94□□□□□ -0.18
PrnpP04925 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.94□□□□□ -0.18
PrnpP04925 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PrnpP04925 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
PrnpP04925 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.94□□□□□ -0.18
PrnpP04925 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PrnpP04925 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PrnpP04925 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PrnpP04925 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PrnpP04925 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PrnpP04925 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PrnpP04925 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms