Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.88□□□□□ -0.51
P04224 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.88□□□□□ -0.51
P04224 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.88□□□□□ -0.51
P04224 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.88□□□□□ -0.51
P04224 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.88□□□□□ -0.51
P04224 Gm15483-201ENSMUST00000120338 456 ntBASIC11.88□□□□□ -0.51
P04224 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Gm2651-201ENSMUST00000203560 838 ntBASIC11.88□□□□□ -0.51
P04224 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.88□□□□□ -0.51
P04224 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.88□□□□□ -0.51
P04224 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.88□□□□□ -0.51
P04224 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.88□□□□□ -0.51
P04224 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.88□□□□□ -0.51
P04224 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
P04224 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04224 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P04224 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
P04224 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
P04224 Gm9385-201ENSMUST00000117563 472 ntBASIC11.87□□□□□ -0.51
P04224 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
P04224 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.87□□□□□ -0.51
P04224 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.87□□□□□ -0.51
P04224 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
P04224 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
P04224 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04224 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.87□□□□□ -0.51
P04224 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
P04224 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
P04224 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P04224 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.86□□□□□ -0.51
P04224 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.86□□□□□ -0.51
P04224 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.86□□□□□ -0.51
P04224 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.86□□□□□ -0.51
P04224 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.86□□□□□ -0.51
P04224 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
P04224 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms