Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ifnb1P01575 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ifnb1P01575 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ifnb1P01575 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.29□□□□□ -0.12
Ifnb1P01575 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ifnb1P01575 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.29□□□□□ -0.12
Ifnb1P01575 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.29□□□□□ -0.12
Ifnb1P01575 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.29□□□□□ -0.12
Ifnb1P01575 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ifnb1P01575 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.29□□□□□ -0.12
Ifnb1P01575 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.29□□□□□ -0.12
Ifnb1P01575 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ifnb1P01575 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.28□□□□□ -0.12
Ifnb1P01575 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.28□□□□□ -0.12
Ifnb1P01575 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.28□□□□□ -0.12
Ifnb1P01575 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ifnb1P01575 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ifnb1P01575 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.27□□□□□ -0.12
Ifnb1P01575 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.27□□□□□ -0.12
Ifnb1P01575 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ifnb1P01575 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ifnb1P01575 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.27□□□□□ -0.12
Ifnb1P01575 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ifnb1P01575 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifnb1P01575 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ifnb1P01575 Gm44872-201ENSMUST00000207864 420 ntBASIC14.27□□□□□ -0.13
Ifnb1P01575 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.27□□□□□ -0.13
Ifnb1P01575 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.27□□□□□ -0.13
Ifnb1P01575 Gm20445-201ENSMUST00000061905 565 ntBASIC14.27□□□□□ -0.13
Ifnb1P01575 Gm5867-201ENSMUST00000063197 592 ntBASIC14.27□□□□□ -0.13
Ifnb1P01575 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifnb1P01575 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.27□□□□□ -0.13
Ifnb1P01575 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifnb1P01575 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifnb1P01575 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ifnb1P01575 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ifnb1P01575 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms