Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.97□□□□□ -0.17
CopeO89079 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.97□□□□□ -0.17
CopeO89079 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CopeO89079 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.96□□□□□ -0.17
CopeO89079 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CopeO89079 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.96□□□□□ -0.17
CopeO89079 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.96□□□□□ -0.17
CopeO89079 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.96□□□□□ -0.17
CopeO89079 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.96□□□□□ -0.17
CopeO89079 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Gm43125-201ENSMUST00000201724 730 ntBASIC13.96□□□□□ -0.17
CopeO89079 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.96□□□□□ -0.17
CopeO89079 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.96□□□□□ -0.17
CopeO89079 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CopeO89079 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopeO89079 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.96□□□□□ -0.18
CopeO89079 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopeO89079 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopeO89079 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CopeO89079 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CopeO89079 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CopeO89079 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.95□□□□□ -0.18
CopeO89079 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CopeO89079 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CopeO89079 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.95□□□□□ -0.18
CopeO89079 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.95□□□□□ -0.18
CopeO89079 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.95□□□□□ -0.18
CopeO89079 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.95□□□□□ -0.18
CopeO89079 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CopeO89079 Gm8927-201ENSMUST00000181978 981 ntBASIC13.95□□□□□ -0.18
CopeO89079 Mir6990-201ENSMUST00000183724 91 ntBASIC13.95□□□□□ -0.18
CopeO89079 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Gm3222-201ENSMUST00000071282 990 ntBASIC13.95□□□□□ -0.18
CopeO89079 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CopeO89079 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CopeO89079 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CopeO89079 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CopeO89079 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
CopeO89079 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CopeO89079 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CopeO89079 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.94□□□□□ -0.18
CopeO89079 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CopeO89079 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CopeO89079 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CopeO89079 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CopeO89079 Gm15460-201ENSMUST00000118147 391 ntBASIC13.94□□□□□ -0.18
CopeO89079 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CopeO89079 Gm21470-201ENSMUST00000187680 696 ntBASIC13.94□□□□□ -0.18
CopeO89079 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CopeO89079 Syt7-205ENSMUST00000224135 1557 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms