Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Mir1897-201ENSMUST00000122581 272 ntBASIC12.93□□□□□ -0.34
Vti1bO88384 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Vti1bO88384 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.93□□□□□ -0.34
Vti1bO88384 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vti1bO88384 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vti1bO88384 Gm38294-201ENSMUST00000192831 381 ntBASIC12.93□□□□□ -0.34
Vti1bO88384 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.93□□□□□ -0.34
Vti1bO88384 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Vti1bO88384 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.93□□□□□ -0.34
Vti1bO88384 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vti1bO88384 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.92□□□□□ -0.34
Vti1bO88384 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.92□□□□□ -0.34
Vti1bO88384 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.92□□□□□ -0.34
Vti1bO88384 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vti1bO88384 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.92□□□□□ -0.34
Vti1bO88384 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Gm6888-201ENSMUST00000221983 706 ntBASIC12.92□□□□□ -0.34
Vti1bO88384 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vti1bO88384 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Vti1bO88384 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.92□□□□□ -0.34
Vti1bO88384 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vti1bO88384 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vti1bO88384 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Vti1bO88384 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vti1bO88384 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.91□□□□□ -0.34
Vti1bO88384 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Gm13453-201ENSMUST00000118708 357 ntBASIC12.91□□□□□ -0.34
Vti1bO88384 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vti1bO88384 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.91□□□□□ -0.34
Vti1bO88384 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.91□□□□□ -0.34
Vti1bO88384 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 AA543401-201ENSMUST00000164248 1269 ntBASIC12.91□□□□□ -0.34
Vti1bO88384 Gm17837-201ENSMUST00000186435 985 ntBASIC12.91□□□□□ -0.34
Vti1bO88384 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.91□□□□□ -0.34
Vti1bO88384 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.91□□□□□ -0.34
Vti1bO88384 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.91□□□□□ -0.34
Vti1bO88384 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.91□□□□□ -0.34
Vti1bO88384 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms