Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.41□□□□□ -0.74
Gm10226O88253 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Gm10226O88253 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.41□□□□□ -0.74
Gm10226O88253 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Gm10226O88253 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.41□□□□□ -0.74
Gm10226O88253 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Gm10226O88253 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Gm10226O88253 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10226O88253 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Gm10226O88253 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.4□□□□□ -0.74
Gm10226O88253 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Gm10226O88253 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Gm10226O88253 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Gm10226O88253 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Gm12390-201ENSMUST00000117897 397 ntBASIC10.4□□□□□ -0.74
Gm10226O88253 Gm10156-201ENSMUST00000122364 462 ntBASIC10.4□□□□□ -0.74
Gm10226O88253 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Gm10226O88253 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.4□□□□□ -0.74
Gm10226O88253 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.4□□□□□ -0.74
Gm10226O88253 Gm7561-201ENSMUST00000211203 886 ntBASIC10.4□□□□□ -0.74
Gm10226O88253 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.4□□□□□ -0.74
Gm10226O88253 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.4□□□□□ -0.74
Gm10226O88253 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Gm10226O88253 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Gm10226O88253 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Gm10226O88253 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10226O88253 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Gm10226O88253 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gm10226O88253 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Gm10226O88253 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Gm10226O88253 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.39□□□□□ -0.75
Gm10226O88253 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.39□□□□□ -0.75
Gm10226O88253 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Gm10226O88253 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Gm10226O88253 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms