Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ubr1O70481 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC17.23■□□□□ 0.35
Ubr1O70481 Gm25732-201ENSMUST00000175168 60 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC17.23■□□□□ 0.35
Ubr1O70481 Gm5363-201ENSMUST00000211927 938 ntBASIC17.23■□□□□ 0.35
Ubr1O70481 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Ubr1O70481 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Ubr1O70481 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ubr1O70481 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ubr1O70481 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ubr1O70481 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ubr1O70481 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Gm14726-201ENSMUST00000120623 896 ntBASIC17.22■□□□□ 0.35
Ubr1O70481 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
Ubr1O70481 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.22■□□□□ 0.35
Ubr1O70481 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.22■□□□□ 0.35
Ubr1O70481 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.22■□□□□ 0.35
Ubr1O70481 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Gm22058-201ENSMUST00000083393 310 ntBASIC17.22■□□□□ 0.35
Ubr1O70481 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ubr1O70481 Mir433-201ENSMUST00000093564 124 ntBASIC17.22■□□□□ 0.35
Ubr1O70481 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.21■□□□□ 0.35
Ubr1O70481 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.21■□□□□ 0.35
Ubr1O70481 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Gm12502-201ENSMUST00000120197 444 ntBASIC17.21■□□□□ 0.35
Ubr1O70481 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC17.21■□□□□ 0.35
Ubr1O70481 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.21■□□□□ 0.35
Ubr1O70481 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ubr1O70481 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ubr1O70481 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.2■□□□□ 0.34
Ubr1O70481 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.2■□□□□ 0.34
Ubr1O70481 Gm13736-201ENSMUST00000119272 253 ntBASIC17.2■□□□□ 0.34
Ubr1O70481 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.2■□□□□ 0.34
Ubr1O70481 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.2■□□□□ 0.34
Ubr1O70481 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ubr1O70481 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Gm14208-201ENSMUST00000119645 678 ntBASIC17.2■□□□□ 0.34
Ubr1O70481 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 Gm2546-201ENSMUST00000182630 991 ntBASIC17.2■□□□□ 0.34
Ubr1O70481 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ubr1O70481 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ubr1O70481 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms